MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Actinomyces bowdenii
WMus004.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 457
bases: 3,191,231 bps
CDS: 2,590
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 56
misc RNA:
Total features: 2,650
Total number of protein coding genes annotated/found:
2,590
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5001|JADGKF010000104.1
SEQF5001_00043
Genome Viewer
NA
AA
882/294
9319-8438
hypothetical protein
SEQF5001|JADGKF010000105.1
SEQF5001_00045
Genome Viewer
NA
AA
1212/404
2157-3368
hypothetical protein
SEQF5001|JADGKF010000105.1
SEQF5001_00048
Genome Viewer
NA
AA
1533/511
7993-6461
hypothetical protein
SEQF5001|JADGKF010000105.1
SEQF5001_00050
Genome Viewer
NA
AA
702/234
9750-9049
hypothetical protein
SEQF5001|JADGKF010000106.1
SEQF5001_00051
Genome Viewer
NA
AA
801/267
234-1034
hypothetical protein
SEQF5001|JADGKF010000106.1
SEQF5001_00052
Genome Viewer
NA
AA
1524/508
2478-955
hypothetical protein
SEQF5001|JADGKF010000106.1
SEQF5001_00054
Genome Viewer
NA
AA
150/50
4155-4006
hypothetical protein
SEQF5001|JADGKF010000106.1
SEQF5001_00055
Genome Viewer
NA
AA
450/150
4412-4861
hypothetical protein
SEQF5001|JADGKF010000106.1
SEQF5001_00056
Genome Viewer
NA
AA
498/166
4922-5419
hypothetical protein
SEQF5001|JADGKF010000106.1
SEQF5001_00058
Genome Viewer
NA
AA
771/257
7064-6294
Putative glyoxylase CFP32
SEQF5001|JADGKF010000106.1
SEQF5001_00060
Genome Viewer
NA
AA
1086/362
8260-9345
Proline racemase
SEQF5001|JADGKF010000107.1
SEQF5001_00061
Genome Viewer
NA
AA
603/201
722-120
Fimbrial subunit type 1
SEQF5001|JADGKF010000107.1
SEQF5001_00062
Genome Viewer
NA
AA
2916/972
3784-869
hypothetical protein
SEQF5001|JADGKF010000107.1
SEQF5001_00067
Genome Viewer
NA
AA
480/160
9558-9079
hypothetical protein
SEQF5001|JADGKF010000108.1
SEQF5001_00068
Genome Viewer
NA
AA
348/116
109-456
Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase
SEQF5001|JADGKF010000108.1
SEQF5001_00069
Genome Viewer
NA
AA
1182/394
485-1666
hypothetical protein
SEQF5001|JADGKF010000108.1
SEQF5001_00070
Genome Viewer
NA
AA
447/149
2191-1745
hypothetical protein
SEQF5001|JADGKF010000108.1
SEQF5001_00071
Genome Viewer
NA
AA
891/297
3263-2373
hypothetical protein
SEQF5001|JADGKF010000108.1
SEQF5001_00072
Genome Viewer
NA
AA
309/103
3594-3902
hypothetical protein
SEQF5001|JADGKF010000108.1
SEQF5001_00073
Genome Viewer
NA
AA
696/232
4681-3986
hypothetical protein
🡄
Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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